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vg
tools for working with variation graphs
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This is the complete list of members for handlegraph::BuildableSnarlDecomposition, including all inherited members.
| build_snarl_decomposition(const decomposition_source_t &traverse_decomposition)=0 | handlegraph::BuildableSnarlDecomposition | pure virtual |
| canonical(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| decomposition_source_t typedef | handlegraph::BuildableSnarlDecomposition | |
| END enum value | handlegraph::SnarlDecomposition | |
| endpoint_t enum name | handlegraph::SnarlDecomposition | |
| ends_at(const net_handle_t &traversal) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| ends_at_end(const net_handle_t &net) const | handlegraph::SnarlDecomposition | inline |
| ends_at_start(const net_handle_t &net) const | handlegraph::SnarlDecomposition | inline |
| ends_at_tip(const net_handle_t &net) const | handlegraph::SnarlDecomposition | inline |
| flip(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| follow_net_edges(const net_handle_t &here, const HandleGraph *graph, bool go_left, const Iteratee &iteratee) const | handlegraph::SnarlDecomposition | |
| follow_net_edges_impl(const net_handle_t &here, const HandleGraph *graph, bool go_left, const std::function< bool(const net_handle_t &)> &iteratee) const =0 | handlegraph::SnarlDecomposition | protectedpure virtual |
| for_each_child(const net_handle_t &parent, const Iteratee &iteratee) const | handlegraph::SnarlDecomposition | |
| for_each_child_impl(const net_handle_t &traversal, const std::function< bool(const net_handle_t &)> &iteratee) const =0 | handlegraph::SnarlDecomposition | protectedpure virtual |
| for_each_tippy_child(const net_handle_t &parent, const Iteratee &iteratee) const | handlegraph::SnarlDecomposition | |
| for_each_tippy_child_impl(const net_handle_t &parent, const std::function< bool(const net_handle_t &)> &iteratee) const | handlegraph::SnarlDecomposition | protectedvirtual |
| for_each_traversal(const net_handle_t &item, const Iteratee &iteratee) const | handlegraph::SnarlDecomposition | |
| for_each_traversal_end(const net_handle_t &traversal, const Iteratee &) const | handlegraph::SnarlDecomposition | |
| for_each_traversal_end_impl(const net_handle_t &traversal, const std::function< bool(const net_handle_t &)> &iteratee) const | handlegraph::SnarlDecomposition | protectedvirtual |
| for_each_traversal_impl(const net_handle_t &item, const std::function< bool(const net_handle_t &)> &iteratee) const =0 | handlegraph::SnarlDecomposition | protectedpure virtual |
| for_each_traversal_start(const net_handle_t &traversal, const Iteratee &) const | handlegraph::SnarlDecomposition | |
| for_each_traversal_start_impl(const net_handle_t &traversal, const std::function< bool(const net_handle_t &)> &iteratee) const | handlegraph::SnarlDecomposition | protectedvirtual |
| get_bound(const net_handle_t &snarl, bool get_end, bool face_in) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| get_end_bound(const net_handle_t &parent) const | handlegraph::SnarlDecomposition | inline |
| get_handle(const net_handle_t &net, const HandleGraph *graph) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| get_net(const handle_t &handle, const HandleGraph *graph) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| get_parent(const net_handle_t &child) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| get_parent_traversal(const net_handle_t &traversal_start, const net_handle_t &traversal_end) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| get_root() const =0 | handlegraph::SnarlDecomposition | pure virtual |
| get_start_bound(const net_handle_t &parent) const | handlegraph::SnarlDecomposition | inline |
| is_chain(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| is_node(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| is_root(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| is_sentinel(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| is_snarl(const net_handle_t &net) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| START enum value | handlegraph::SnarlDecomposition | |
| starts_at(const net_handle_t &traversal) const =0 | handlegraph::SnarlDecomposition | pure virtual |
| starts_at_end(const net_handle_t &net) const | handlegraph::SnarlDecomposition | inline |
| starts_at_start(const net_handle_t &net) const | handlegraph::SnarlDecomposition | inline |
| starts_at_tip(const net_handle_t &net) const | handlegraph::SnarlDecomposition | inline |
| TIP enum value | handlegraph::SnarlDecomposition | |
| ~BuildableSnarlDecomposition()=default | handlegraph::BuildableSnarlDecomposition | virtual |
| ~SnarlDecomposition()=default | handlegraph::SnarlDecomposition | virtual |
1.8.17