vg::HTSWriter Member List

This is the complete list of members for vg::HTSWriter, including all inherited members.

atomic_header	vg::HTSWriter	protected
backing_files	vg::HTSWriter	protected
BGZF_FOOTER_LENGTH	vg::HTSWriter	protectedstatic
ensure_header(const string &read_group, const string &sample_name, size_t thread_number)	vg::HTSWriter	protected
format	vg::HTSWriter	protected
header_mutex	vg::HTSWriter	protected
hts_mode	vg::HTSWriter	protected
HTSLIB_CRAM_THREADS	vg::HTSWriter	protectedstatic
HTSWriter(const string &filename, const string &format, const SequenceDictionary &sequence_dictionary, const unordered_map< string, size_t > &subpath_to_index, size_t max_threads)	vg::HTSWriter
HTSWriter(const HTSWriter &other)=delete	vg::HTSWriter
HTSWriter(HTSWriter &&other)=delete	vg::HTSWriter
initialize_sam_file(bam_hdr_t *header, size_t thread_number, bool keep_header=false)	vg::HTSWriter	protected
multiplexer	vg::HTSWriter	protected
operator=(const HTSWriter &other)=delete	vg::HTSWriter
operator=(HTSWriter &&other)=delete	vg::HTSWriter
out_file	vg::HTSWriter	protected
output_is_bgzf	vg::HTSWriter	protected
sam_files	vg::HTSWriter	protected
sam_header	vg::HTSWriter	protected
save_records(bam_hdr_t *header, vector< bam1_t * > &records, size_t thread_number)	vg::HTSWriter	protected
sequence_dictionary	vg::HTSWriter	protected
subpath_to_index	vg::HTSWriter	protected
~HTSWriter()	vg::HTSWriter