vg::KmerPresenceMatrix Member List

This is the complete list of members for vg::KmerPresenceMatrix, including all inherited members.

absent enum value	vg::KmerPresenceMatrix
child_rank(size_t rank) const	vg::KmerPresenceMatrix	inlineprivate
children	vg::KmerPresenceMatrix	private
compact_sequence_type typedef	vg::KmerPresenceMatrix
diploid_score(size_t first, size_t second, const std::vector< std::pair< kmer_classification, double >> &kmers) const	vg::KmerPresenceMatrix
empty() const	vg::KmerPresenceMatrix	inline
for_each_kmer(size_t sequence, const std::function< void(size_t, bool)> &callback) const	vg::KmerPresenceMatrix
frequent enum value	vg::KmerPresenceMatrix
get_num_kmers() const	vg::KmerPresenceMatrix	inline
get_num_parents() const	vg::KmerPresenceMatrix	inline
get_num_present(size_t sequence) const	vg::KmerPresenceMatrix
get_num_sequences() const	vg::KmerPresenceMatrix	inline
get_total_present() const	vg::KmerPresenceMatrix
heterozygous enum value	vg::KmerPresenceMatrix
is_parent(size_t rank) const	vg::KmerPresenceMatrix	inlineprivate
kmer_classification enum name	vg::KmerPresenceMatrix
KmerPresenceMatrix()	vg::KmerPresenceMatrix
KmerPresenceMatrix(size_t num_sequences, size_t num_kmers, sdsl::bit_vector &&matrix)	vg::KmerPresenceMatrix
KmerPresenceMatrix(const std::vector< sequence_type > &sequences, std::vector< compact_sequence_type > &reordered_sequences, size_t num_kmers, const sdsl::bit_vector &matrix)	vg::KmerPresenceMatrix
KmerPresenceMatrix(const KmerPresenceMatrix &other)=default	vg::KmerPresenceMatrix
KmerPresenceMatrix(KmerPresenceMatrix &&other) noexcept=default	vg::KmerPresenceMatrix
num_kmers	vg::KmerPresenceMatrix	private
operator!=(const KmerPresenceMatrix &other) const	vg::KmerPresenceMatrix	inline
operator=(const KmerPresenceMatrix &other)=default	vg::KmerPresenceMatrix
operator=(KmerPresenceMatrix &&other) noexcept=default	vg::KmerPresenceMatrix
operator==(const KmerPresenceMatrix &other) const	vg::KmerPresenceMatrix
parent(size_t rank) const	vg::KmerPresenceMatrix	inlineprivate
parent_rank	vg::KmerPresenceMatrix	private
parents	vg::KmerPresenceMatrix	private
present enum value	vg::KmerPresenceMatrix
score_sequences(const std::vector< std::pair< kmer_classification, double >> &kmers, const std::function< void(size_t, double)> &sequence_score) const	vg::KmerPresenceMatrix
sequence_type typedef	vg::KmerPresenceMatrix
simple_sds_load(std::istream &in)	vg::KmerPresenceMatrix
simple_sds_serialize(std::ostream &out) const	vg::KmerPresenceMatrix
simple_sds_size() const	vg::KmerPresenceMatrix
size() const	vg::KmerPresenceMatrix	inline