This is the complete list of members for vg::PoissonSupportSnarlCaller, including all inherited members.

baseline_error_large	vg::PoissonSupportSnarlCaller	protected
baseline_error_small	vg::PoissonSupportSnarlCaller	protected
depth_index	vg::PoissonSupportSnarlCaller	protected
depth_padding_factor	vg::PoissonSupportSnarlCaller	protected
genotype(const Snarl &snarl, const vector< SnarlTraversal > &traversals, int ref_trav_idx, int ploidy, const string &ref_path_name, pair< size_t, size_t > ref_range)	vg::PoissonSupportSnarlCaller	virtual
genotype_likelihood(const vector< int > &genotype, const vector< SnarlTraversal > &traversals, const set< int > &trav_subset, const vector< int > &traversal_sizes, const vector< double > &traversal_mapqs, int ref_trav_idx, double exp_depth, double depth_err, int max_trav_size, int ref_trav_size)	vg::PoissonSupportSnarlCaller	protected
get_best_support(const vector< Support > &supports, const vector< int > &skips)	vg::SupportBasedSnarlCaller	protectedstatic
get_min_total_support_for_call() const	vg::SupportBasedSnarlCaller	virtual
get_skip_allele_fn() const	vg::SupportBasedSnarlCaller	virtual
get_support_finder() const	vg::SupportBasedSnarlCaller
graph	vg::SupportBasedSnarlCaller	protected
insertion_bias_large	vg::PoissonSupportSnarlCaller	protected
insertion_bias_small	vg::PoissonSupportSnarlCaller	protected
insertion_threshold	vg::PoissonSupportSnarlCaller	protected
min_alt_path_support	vg::SupportBasedSnarlCaller	protected
min_mad_for_filter	vg::SupportBasedSnarlCaller	protected
min_site_depth	vg::SupportBasedSnarlCaller	protected
min_total_support_for_call	vg::SupportBasedSnarlCaller	protected
PoissonSupportSnarlCaller(const PathHandleGraph &graph, SnarlManager &snarl_manager, TraversalSupportFinder &support_finder, const algorithms::BinnedDepthIndex &depth_index, bool use_mapq)	vg::PoissonSupportSnarlCaller
rank_by_support(const vector< Support > &supports)	vg::PoissonSupportSnarlCaller	protected
set_baseline_error(double small_variant_error, double large_variant_error)	vg::PoissonSupportSnarlCaller
set_insertion_bias(double insertion_threshold, double small_insertion_bias, double large_insertion_bias)	vg::PoissonSupportSnarlCaller
set_min_supports(double min_mad_for_call, double min_support_for_call, double min_site_support)	vg::SupportBasedSnarlCaller
snarl_manager	vg::SupportBasedSnarlCaller	protected
support_finder	vg::SupportBasedSnarlCaller	protected
support_val(const Support &support)	vg::SupportBasedSnarlCaller	inlineprotectedstatic
SupportBasedSnarlCaller(const PathHandleGraph &graph, SnarlManager &snarl_manager, TraversalSupportFinder &support_finder)	vg::SupportBasedSnarlCaller
top_k	vg::PoissonSupportSnarlCaller	protected
top_m	vg::PoissonSupportSnarlCaller	protected
update_vcf_header(string &header) const	vg::PoissonSupportSnarlCaller	virtual
update_vcf_info(const Snarl &snarl, const vector< SnarlTraversal > &traversals, const vector< int > &genotype, const unique_ptr< CallInfo > &call_info, const string &sample_name, vcflib::Variant &variant)	vg::PoissonSupportSnarlCaller	virtual
use_mapq	vg::PoissonSupportSnarlCaller	protected
~PoissonSupportSnarlCaller()	vg::PoissonSupportSnarlCaller	virtual
~SnarlCaller()	vg::SnarlCaller	virtual
~SupportBasedSnarlCaller()	vg::SupportBasedSnarlCaller	virtual