This is the complete list of members for vg::PrimerFinder, including all inherited members.

add_primer_pair(const string &path_name, const size_t &left_primer_starting_node_id, const size_t &left_primer_offset, const size_t &left_primer_length, const size_t &right_primer_starting_node_id, const size_t &right_primer_offset, const size_t &right_primer_length)	vg::PrimerFinder
chroms	vg::PrimerFinder	private
distance_index	vg::PrimerFinder	private
gbwt_graph	vg::PrimerFinder	private
gbwt_index	vg::PrimerFinder	private
get_graph_coordinates_from_sequence(const string &seq)	vg::PrimerFinder	private
get_primer_pairs_of_chrom(const string &chrom_name) const	vg::PrimerFinder
get_reference_paths()	vg::PrimerFinder
giraffe_mapper	vg::PrimerFinder	private
graph	vg::PrimerFinder	private
load_primers(ifstream &file_handle)	vg::PrimerFinder
longest_match_len(Primer &primer, const string &left_seq, const string &right_seq, const bool &first_node)	vg::PrimerFinder	private
make_primer(Primer &primer, const string &path_name, const size_t &starting_node_id, const size_t &offset, const size_t &length, const bool &is_left)	vg::PrimerFinder	private
map_to_nodes(Primer &primer, const string &path_name)	vg::PrimerFinder	private
PrimerFinder()=default	vg::PrimerFinder
PrimerFinder(const unique_ptr< handlegraph::PathPositionHandleGraph > &graph_param, const SnarlDistanceIndex distance_index_param, ifstream &primers_file_handle, const gbwtgraph::GBWTGraph &gbwt_graph, const gbwt::GBWT &gbwt_index, const gbwt::FastLocate &r_index, MinimizerMapper giraffe_mapper_param=nullptr)	vg::PrimerFinder
r_index	vg::PrimerFinder	private
split(const string &str)	vg::PrimerFinder	private
split(const string &str, const char &delim)	vg::PrimerFinder	private
startswith(const string &str, const string &prefix)	vg::PrimerFinder	private
strip(const string &s) const	vg::PrimerFinder	private
total_reference_paths() const	vg::PrimerFinder
update_min_max_product_size(PrimerPair &primer_pair)	vg::PrimerFinder	private
update_variation(PrimerPair &primer_pair, const string &path_name)	vg::PrimerFinder	private
~PrimerFinder()	vg::PrimerFinder