vg
tools for working with variation graphs
vg
RareVariantSimplifier
vg::RareVariantSimplifier Member List
This is the complete list of members for
vg::RareVariantSimplifier
, including all inherited members.
create_progress
(const string &message, long count)
vg::Progressive
create_progress
(long count)
vg::Progressive
destroy_progress
(void)
vg::Progressive
ensure_progress
(long count)
vg::Progressive
graph
vg::RareVariantSimplifier
protected
increment_progress
()
vg::Progressive
last_progress
vg::Progressive
private
min_count_to_keep
vg::RareVariantSimplifier
min_frequency_to_keep
vg::RareVariantSimplifier
preload_progress
(const string &message)
vg::Progressive
progress
vg::Progressive
private
progress_count
vg::Progressive
private
progress_message
vg::Progressive
private
progress_seen
vg::Progressive
private
RareVariantSimplifier
(MutablePathDeletableHandleGraph &graph, VcfBuffer &variant_source)
vg::RareVariantSimplifier
show_progress
vg::Progressive
simplify
()
vg::RareVariantSimplifier
update_progress
(long i)
vg::Progressive
variant_source
vg::RareVariantSimplifier
protected
with_progress
(bool show_progress, const std::string &task, const std::function< void(const std::function< void(size_t, size_t)> &progress)> &callback)
vg::Progressive
static
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