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vg
tools for working with variation graphs
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This is the complete list of members for vg::SnarlCaller, including all inherited members.
| genotype(const Snarl &snarl, const vector< SnarlTraversal > &traversals, int ref_trav_idx, int ploidy, const string &ref_path_name, pair< size_t, size_t > ref_range)=0 | vg::SnarlCaller | pure virtual |
| get_skip_allele_fn() const | vg::SnarlCaller | virtual |
| update_vcf_header(string &header) const =0 | vg::SnarlCaller | pure virtual |
| update_vcf_info(const Snarl &snarl, const vector< SnarlTraversal > &traversals, const vector< int > &genotype, const unique_ptr< CallInfo > &call_info, const string &sample_name, vcflib::Variant &variant)=0 | vg::SnarlCaller | pure virtual |
| ~SnarlCaller() | vg::SnarlCaller | virtual |
1.8.17