vg
tools for working with variation graphs
vg::SpliceStats Member List

This is the complete list of members for vg::SpliceStats, including all inherited members.

component_paramsvg::SpliceStatsprivate
init(const vector< tuple< string, string, double >> &motifs, const vector< double > &lognormal_mixture_weights, const vector< pair< double, double >> &lognormal_component_params, const GSSWAligner &scorer)vg::SpliceStatsprivate
intron_length_log_likelihood(int64_t length) constvg::SpliceStatsprivate
intron_length_score(int64_t length) constvg::SpliceStats
log_basevg::SpliceStatsprivate
mixture_weightsvg::SpliceStatsprivate
mode_log_likelihoodvg::SpliceStatsprivate
motif_datavg::SpliceStatsprivate
motif_frequency(size_t motif_num) constvg::SpliceStats
motif_is_reverse(size_t motif_num) constvg::SpliceStats
motif_score(size_t motif_num) constvg::SpliceStats
motif_size() constvg::SpliceStats
oriented_motif(size_t motif_num, bool left_side) constvg::SpliceStats
SpliceStats(const GSSWAligner &scorer)vg::SpliceStats
SpliceStats(const vector< tuple< string, string, double >> &motifs, const vector< double > &lognormal_mixture_weights, const vector< pair< double, double >> &lognormal_component_params, const GSSWAligner &scorer)vg::SpliceStats
unaltered_motif_datavg::SpliceStatsprivate
unoriented_motif(size_t motif_num, bool left_side) constvg::SpliceStats
update_intron_length_distribution(const vector< double > &lognormal_mixture_weights, const vector< pair< double, double >> &lognormal_component_params, const GSSWAligner &scorer)vg::SpliceStats
update_motifs(const vector< tuple< string, string, double >> &motifs, const GSSWAligner &scorer)vg::SpliceStats
update_scoring(const GSSWAligner &scorer)vg::SpliceStats