vg
tools for working with variation graphs
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This is the complete list of members for vg::SpliceStats, including all inherited members.
component_params | vg::SpliceStats | private |
init(const vector< tuple< string, string, double >> &motifs, const vector< double > &lognormal_mixture_weights, const vector< pair< double, double >> &lognormal_component_params, const GSSWAligner &scorer) | vg::SpliceStats | private |
intron_length_log_likelihood(int64_t length) const | vg::SpliceStats | private |
intron_length_score(int64_t length) const | vg::SpliceStats | |
log_base | vg::SpliceStats | private |
mixture_weights | vg::SpliceStats | private |
mode_log_likelihood | vg::SpliceStats | private |
motif_data | vg::SpliceStats | private |
motif_frequency(size_t motif_num) const | vg::SpliceStats | |
motif_is_reverse(size_t motif_num) const | vg::SpliceStats | |
motif_score(size_t motif_num) const | vg::SpliceStats | |
motif_size() const | vg::SpliceStats | |
oriented_motif(size_t motif_num, bool left_side) const | vg::SpliceStats | |
SpliceStats(const GSSWAligner &scorer) | vg::SpliceStats | |
SpliceStats(const vector< tuple< string, string, double >> &motifs, const vector< double > &lognormal_mixture_weights, const vector< pair< double, double >> &lognormal_component_params, const GSSWAligner &scorer) | vg::SpliceStats | |
unaltered_motif_data | vg::SpliceStats | private |
unoriented_motif(size_t motif_num, bool left_side) const | vg::SpliceStats | |
update_intron_length_distribution(const vector< double > &lognormal_mixture_weights, const vector< pair< double, double >> &lognormal_component_params, const GSSWAligner &scorer) | vg::SpliceStats | |
update_motifs(const vector< tuple< string, string, double >> &motifs, const GSSWAligner &scorer) | vg::SpliceStats | |
update_scoring(const GSSWAligner &scorer) | vg::SpliceStats |