vg
tools for working with variation graphs
vg::StrandSplitGraph Member List

This is the complete list of members for vg::StrandSplitGraph, including all inherited members.

edge_handle(const handle_t &left, const handle_t &right) consthandlegraph::HandleGraph
flip(const handle_t &handle) constvg::StrandSplitGraphvirtual
follow_edges(const handle_t &handle, bool go_left, const Iteratee &iteratee) consthandlegraph::HandleGraph
follow_edges_impl(const handle_t &handle, bool go_left, const function< bool(const handle_t &)> &iteratee) constvg::StrandSplitGraph
handlegraph::ExpandingOverlayGraph::follow_edges_impl(const handle_t &handle, bool go_left, const std::function< bool(const handle_t &)> &iteratee) const =0handlegraph::HandleGraphprotectedpure virtual
for_each_edge(const Iteratee &iteratee, bool parallel=false) consthandlegraph::HandleGraph
for_each_handle(const Iteratee &iteratee, bool parallel=false) consthandlegraph::HandleGraph
for_each_handle_impl(const function< bool(const handle_t &)> &iteratee, bool parallel=false) constvg::StrandSplitGraph
handlegraph::ExpandingOverlayGraph::for_each_handle_impl(const std::function< bool(const handle_t &)> &iteratee, bool parallel=false) const =0handlegraph::HandleGraphprotectedpure virtual
forward(const handle_t &handle) consthandlegraph::HandleGraph
get_base(const handle_t &handle, size_t index) consthandlegraph::HandleGraphvirtual
get_degree(const handle_t &handle, bool go_left) consthandlegraph::HandleGraphvirtual
get_edge_count() consthandlegraph::HandleGraphvirtual
get_handle(const id_t &node_id, bool is_reverse=false) constvg::StrandSplitGraphvirtual
get_id(const handle_t &handle) constvg::StrandSplitGraphvirtual
get_is_reverse(const handle_t &handle) constvg::StrandSplitGraphvirtual
get_length(const handle_t &handle) constvg::StrandSplitGraphvirtual
get_node_count() constvg::StrandSplitGraphvirtual
get_overlay_handle(const handle_t &underlying_handle) constvg::StrandSplitGraph
get_sequence(const handle_t &handle) constvg::StrandSplitGraphvirtual
get_subsequence(const handle_t &handle, size_t index, size_t size) consthandlegraph::HandleGraphvirtual
get_total_length() consthandlegraph::HandleGraphvirtual
get_underlying_handle(const handle_t &handle) constvg::StrandSplitGraphvirtual
graphvg::StrandSplitGraphprivate
has_edge(const handle_t &left, const handle_t &right) consthandlegraph::HandleGraphvirtual
has_edge(const edge_t &edge) consthandlegraph::HandleGraphinline
has_node(id_t node_id) constvg::StrandSplitGraphvirtual
has_overlay_node_for(const nid_t &underlying_id) constvg::StrandSplitGraph
max_node_id() constvg::StrandSplitGraphvirtual
min_node_id() constvg::StrandSplitGraphvirtual
StrandSplitGraph(const HandleGraph *graph)vg::StrandSplitGraph
StrandSplitGraph()=defaultvg::StrandSplitGraph
traverse_edge_handle(const edge_t &edge, const handle_t &left) consthandlegraph::HandleGraph
~ExpandingOverlayGraph()=defaulthandlegraph::ExpandingOverlayGraphvirtual
~HandleGraph()=defaulthandlegraph::HandleGraphvirtual
~StrandSplitGraph()=defaultvg::StrandSplitGraph