vg
tools for working with variation graphs
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This is the complete list of members for vg::VGset, including all inherited members.
filenames | vg::VGset | |
for_each(std::function< void(HandleGraph *)> lambda) | vg::VGset | |
for_each_kmer_parallel(size_t kmer_size, const function< void(const kmer_t &)> &lambda) | vg::VGset | |
max_node_id(void) | vg::VGset | |
merge_id_space(void) | vg::VGset | |
progress_bars | vg::VGset | |
show_progress | vg::VGset | |
to_xg(xg::XG &index) | vg::VGset | |
to_xg(xg::XG &index, const function< bool(const string &)> &paths_to_take, map< string, Path > *removed_paths=nullptr) | vg::VGset | |
transform(std::function< void(MutableHandleGraph *)> lambda) | vg::VGset | |
VGset() | vg::VGset | inline |
VGset(vector< string > &files) | vg::VGset | inline |
write_gcsa_kmers_ascii(ostream &out, int kmer_size, nid_t head_id=0, nid_t tail_id=0) | vg::VGset | |
write_gcsa_kmers_binary(ostream &out, int kmer_size, size_t &size_limit, nid_t head_id=0, nid_t tail_id=0) | vg::VGset | |
write_gcsa_kmers_binary(int kmer_size, size_t &size_limit, nid_t head_id=0, nid_t tail_id=0) | vg::VGset |