vg
tools for working with variation graphs
vg::algorithms::Anchor Member List

This is the complete list of members for vg::algorithms::Anchor, including all inherited members.

Anchor(size_t read_start, const pos_t &graph_start, size_t length, size_t margin_before, size_t margin_after, int score, size_t seed_number=std::numeric_limits< size_t >::max(), ZipCode *hint=nullptr, size_t hint_start=0, bool skippable=false)vg::algorithms::Anchorinline
Anchor(const Anchor &first, const Anchor &last, size_t extra_margin_before, size_t extra_margin_after, int score)vg::algorithms::Anchorinline
Anchor()=defaultvg::algorithms::Anchor
Anchor(const Anchor &other)=defaultvg::algorithms::Anchor
Anchor(Anchor &&other)=defaultvg::algorithms::Anchor
base_seed_length() constvg::algorithms::Anchorinline
end_hint() constvg::algorithms::Anchorinline
end_hint_offset() constvg::algorithms::Anchorinline
end_offsetvg::algorithms::Anchorprotected
end_posvg::algorithms::Anchorprotected
end_seedvg::algorithms::Anchorprotected
end_zipvg::algorithms::Anchorprotected
graph_end() constvg::algorithms::Anchorinline
graph_start() constvg::algorithms::Anchorinline
is_skippable() constvg::algorithms::Anchorinline
length() constvg::algorithms::Anchorinline
margin_aftervg::algorithms::Anchorprotected
margin_beforevg::algorithms::Anchorprotected
operator=(const Anchor &other)=defaultvg::algorithms::Anchor
operator=(Anchor &&other)=defaultvg::algorithms::Anchor
pointsvg::algorithms::Anchorprotected
read_end() constvg::algorithms::Anchorinline
read_exclusion_end() constvg::algorithms::Anchorinline
read_exclusion_start() constvg::algorithms::Anchorinline
read_start() constvg::algorithms::Anchorinline
score() constvg::algorithms::Anchorinline
seed_end() constvg::algorithms::Anchorinline
seed_lengthvg::algorithms::Anchorprotected
seed_start() constvg::algorithms::Anchorinline
sizevg::algorithms::Anchorprotected
skippablevg::algorithms::Anchorprotected
startvg::algorithms::Anchorprotected
start_hint() constvg::algorithms::Anchorinline
start_hint_offset() constvg::algorithms::Anchorinline
start_offsetvg::algorithms::Anchorprotected
start_posvg::algorithms::Anchorprotected
start_seedvg::algorithms::Anchorprotected
start_zipvg::algorithms::Anchorprotected