This is the complete list of members for vg::algorithms::Anchor, including all inherited members.
| add_path(size_t path) | vg::algorithms::Anchor | inline |
| add_paths(const std::vector< size_t > &anchor_paths) | vg::algorithms::Anchor | inline |
| Anchor(size_t read_start, const pos_t &graph_start, size_t length, size_t margin_before, size_t margin_after, int score, size_t seed_number=std::numeric_limits< size_t >::max(), ZipCode *hint=nullptr, size_t hint_start=0, bool skippable=false, path_flags_t paths=0) | vg::algorithms::Anchor | inline |
| Anchor(const Anchor &first, const Anchor &last, size_t extra_margin_before, size_t extra_margin_after, int score) | vg::algorithms::Anchor | inline |
| Anchor()=default | vg::algorithms::Anchor | |
| Anchor(const Anchor &other)=default | vg::algorithms::Anchor | |
| Anchor(Anchor &&other)=default | vg::algorithms::Anchor | |
| anchor_end_paths() const | vg::algorithms::Anchor | inline |
| anchor_paths() const | vg::algorithms::Anchor | inline |
| anchor_start_paths() const | vg::algorithms::Anchor | inline |
| base_seed_length() const | vg::algorithms::Anchor | inline |
| clear_paths() | vg::algorithms::Anchor | inline |
| end_hint() const | vg::algorithms::Anchor | inline |
| end_hint_offset() const | vg::algorithms::Anchor | inline |
| end_offset | vg::algorithms::Anchor | protected |
| end_paths | vg::algorithms::Anchor | protected |
| end_pos | vg::algorithms::Anchor | protected |
| end_seed | vg::algorithms::Anchor | protected |
| end_zip | vg::algorithms::Anchor | protected |
| graph_end() const | vg::algorithms::Anchor | inline |
| graph_start() const | vg::algorithms::Anchor | inline |
| is_skippable() const | vg::algorithms::Anchor | inline |
| length() const | vg::algorithms::Anchor | inline |
| margin_after | vg::algorithms::Anchor | protected |
| margin_before | vg::algorithms::Anchor | protected |
| operator=(const Anchor &other)=default | vg::algorithms::Anchor | |
| operator=(Anchor &&other)=default | vg::algorithms::Anchor | |
| points | vg::algorithms::Anchor | protected |
| read_end() const | vg::algorithms::Anchor | inline |
| read_exclusion_end() const | vg::algorithms::Anchor | inline |
| read_exclusion_start() const | vg::algorithms::Anchor | inline |
| read_start() const | vg::algorithms::Anchor | inline |
| score() const | vg::algorithms::Anchor | inline |
| seed_end() const | vg::algorithms::Anchor | inline |
| seed_length | vg::algorithms::Anchor | protected |
| seed_start() const | vg::algorithms::Anchor | inline |
| set_paths(const path_flags_t anchor_paths) | vg::algorithms::Anchor | inline |
| set_paths(size_t anchor_start_paths, size_t anchor_end_paths) | vg::algorithms::Anchor | inline |
| set_paths(const std::vector< size_t > &anchor_paths) | vg::algorithms::Anchor | inline |
| size | vg::algorithms::Anchor | protected |
| skippable | vg::algorithms::Anchor | protected |
| start | vg::algorithms::Anchor | protected |
| start_hint() const | vg::algorithms::Anchor | inline |
| start_hint_offset() const | vg::algorithms::Anchor | inline |
| start_offset | vg::algorithms::Anchor | protected |
| start_paths | vg::algorithms::Anchor | protected |
| start_pos | vg::algorithms::Anchor | protected |
| start_seed | vg::algorithms::Anchor | protected |
| start_zip | vg::algorithms::Anchor | protected |
| update_end_paths(const path_flags_t &new_paths) | vg::algorithms::Anchor | inline |
| update_paths(const path_flags_t &new_paths) | vg::algorithms::Anchor | inline |
| update_paths(const std::vector< size_t > &haplotypes) | vg::algorithms::Anchor | inline |
| update_start_paths(const path_flags_t &new_paths) | vg::algorithms::Anchor | inline |
