expand_context.hpp File Reference

#include "../handle.hpp"
#include "structures/rank_pairing_heap.hpp"
#include <queue>
#include <unordered_set>

Namespaces
	vg
	vg::algorithms

Functions
void	vg::algorithms::expand_context (const HandleGraph *source, MutableHandleGraph *subgraph, int64_t dist, bool use_steps, bool expand_forward, bool expand_backward)
void	vg::algorithms::expand_context_with_paths (const PathHandleGraph *source, MutablePathMutableHandleGraph *subgraph, int64_t dist, bool use_steps, bool expand_forward, bool expand_backward)

Detailed Description

Defines algorithm for adding graph material from the context around a subgraph into the subgraph