vg
tools for working with variation graphs
Namespaces | Functions
extract_subchain.hpp File Reference
#include "../handle.hpp"
#include "../hash_map.hpp"

Namespaces

 vg
 

Functions

hash_set< nid_t > vg::extract_subchain (const HandleGraph &graph, handle_t start, handle_t end)
 

Detailed Description

Algorithm that extracts all node ids in a subchain of the snarl decomposition.