- r -

• random_sequence() : vg
• random_sequence_gen() : vg
• range_vector() : vg
• reallocate_atomic_int_vector() : vg::algorithms
• rebuild_gbwt() : vg
• rebuild_gbwt_job() : vg
• recombinator_sanity_checks() : vg
• ref_path_distance() : vg::algorithms
• register_libvg_io() : vg::io
• register_loader_params_json() : vg::io
• register_loader_saver_distance_index() : vg::io
• register_loader_saver_gbwt() : vg::io
• register_loader_saver_gbwtgraph() : vg::io
• register_loader_saver_gbz() : vg::io
• register_loader_saver_gbzgraph() : vg::io
• register_loader_saver_gcsa() : vg::io
• register_loader_saver_gfa() : vg::io
• register_loader_saver_hash_graph() : vg::io
• register_loader_saver_lcp() : vg::io
• register_loader_saver_minimizer() : vg::io
• register_loader_saver_packed_graph() : vg::io
• register_loader_saver_r_index() : vg::io
• register_loader_saver_snarl_manager() : vg::io
• register_loader_saver_vg() : vg::io
• register_loader_saver_xg() : vg::io
• register_loader_saver_zip_codes() : vg::io
• regress() : vg
• remove() : vg::temp_file , xg::temp_file
• remove_duplicate_edges() : vg
• remove_duplicate_nodes() : vg
• remove_duplicates() : vg
• remove_empty_alignment_sections() : vg
• remove_high_degree_nodes() : vg::algorithms
• remove_low_scoring_sections() : vg
• remove_orphan_edges() : vg
• remove_paths() : vg
• replace_in_string() : vg
• report_exception() : vg
• report_library() : vg
• rev_comp_multipath_alignment() : vg
• rev_comp_multipath_alignment_in_place() : vg
• rev_comp_subpath() : vg
• revdna3bit() : xg
• reverse() : vg , xg
• reverse_base_pos() : vg , xg
• reverse_complement() : vg , xg
• reverse_complement_alignment() : vg
• reverse_complement_alignment_in_place() : vg
• reverse_complement_alignments() : vg
• reverse_complement_edit() : vg::io
• reverse_complement_graph() : handlegraph::algorithms
• reverse_complement_in_place() : vg , xg
• reverse_complement_mapping() : vg
• reverse_complement_mapping_in_place() : vg
• reverse_complement_path() : vg
• reverse_complement_path_in_place() : vg
• run_benchmark() : vg
• run_multipath_dp() : vg