pad_band.hpp File Reference

#include "../handle.hpp"
#include <vg/vg.pb.h>
#include <limits>

Namespaces
	vg
	vg::algorithms

Functions
std::function< size_t(const Alignment &, const HandleGraph &)>	vg::algorithms::pad_band_random_walk (double band_padding_multiplier, size_t band_padding_memo_size, size_t max_padding)
std::function< size_t(const Alignment &, const HandleGraph &)>	vg::algorithms::pad_band_min_random_walk (double band_padding_multiplier, size_t band_padding_memo_size, size_t max_padding)
std::function< size_t(const Alignment &, const HandleGraph &)>	vg::algorithms::pad_band_constant (size_t band_padding)
	Get a band padding function that uses a constant value. More...

Detailed Description

Defines algorithm for computing band padding for banded alignment.