vg
tools for working with variation graphs
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#include <iostream>
#include <algorithm>
#include <functional>
#include <cmath>
#include <limits>
#include <unordered_set>
#include <tuple>
#include "handle.hpp"
#include "snarls.hpp"
#include "genotypekit.hpp"
#include "traversal_support.hpp"
#include "algorithms/coverage_depth.hpp"
Classes | |
class | vg::SnarlCaller |
struct | vg::SnarlCaller::CallInfo |
class | vg::SupportBasedSnarlCaller |
class | vg::RatioSupportSnarlCaller |
class | vg::PoissonSupportSnarlCaller |
struct | vg::PoissonSupportSnarlCaller::PoissonCallInfo |
Namespaces | |
vg | |
Functions | |
string | vg::to_string (const HandleGraph &graph, handle_t handle) |
string | vg::to_string (const HandleGraph &graph, edge_t edge) |