vg
tools for working with variation graphs
Classes | Namespaces | Functions
snarl_caller.hpp File Reference
#include <iostream>
#include <algorithm>
#include <functional>
#include <cmath>
#include <limits>
#include <unordered_set>
#include <tuple>
#include "handle.hpp"
#include "snarls.hpp"
#include "genotypekit.hpp"
#include "traversal_support.hpp"
#include "algorithms/coverage_depth.hpp"

Classes

class  vg::SnarlCaller
 
struct  vg::SnarlCaller::CallInfo
 
class  vg::SupportBasedSnarlCaller
 
class  vg::RatioSupportSnarlCaller
 
class  vg::PoissonSupportSnarlCaller
 
struct  vg::PoissonSupportSnarlCaller::PoissonCallInfo
 

Namespaces

 vg
 

Functions

string vg::to_string (const HandleGraph &graph, handle_t handle)
 
string vg::to_string (const HandleGraph &graph, edge_t edge)