vg
tools for working with variation graphs
vg::SnarlDistanceIndexClusterer::ClusteringProblem Member List

This is the complete list of members for vg::SnarlDistanceIndexClusterer::ClusteringProblem, including all inherited members.

all_node_problemsvg::SnarlDistanceIndexClusterer::ClusteringProblem
all_seedsvg::SnarlDistanceIndexClusterer::ClusteringProblem
ClusteringProblem(vector< vector< SeedCache > * > *all_seeds, size_t read_distance_limit, size_t fragment_distance_limit, size_t seed_count)vg::SnarlDistanceIndexClusterer::ClusteringProbleminline
current_chainsvg::SnarlDistanceIndexClusterer::ClusteringProblem
fragment_distance_limitvg::SnarlDistanceIndexClusterer::ClusteringProblem
fragment_union_findvg::SnarlDistanceIndexClusterer::ClusteringProblem
net_handle_to_node_problem_indexvg::SnarlDistanceIndexClusterer::ClusteringProblem
parent_chainsvg::SnarlDistanceIndexClusterer::ClusteringProblem
parent_snarlsvg::SnarlDistanceIndexClusterer::ClusteringProblem
read_distance_limitvg::SnarlDistanceIndexClusterer::ClusteringProblem
read_union_findvg::SnarlDistanceIndexClusterer::ClusteringProblem
root_childrenvg::SnarlDistanceIndexClusterer::ClusteringProblem
seed_count_prefix_sumvg::SnarlDistanceIndexClusterer::ClusteringProblem
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