vg
tools for working with variation graphs
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This is the complete list of members for vg::WFANode, including all inherited members.
append_node(const gbwtgraph::CachedGBWTGraph &graph, gbwt::SearchState next, pos_t target) | vg::WFANode | inlineprivate |
children | vg::WFANode | |
dead_end | vg::WFANode | |
DELETIONS | vg::WFANode | static |
expanded() const | vg::WFANode | inline |
find_pos(size_t type, int32_t score, int32_t diagonal, const MatchPos::PathList &path) const | vg::WFANode | inline |
INSERTIONS | vg::WFANode | static |
is_leaf() const | vg::WFANode | inline |
length() const | vg::WFANode | inline |
match_forward(const std::string &sequence, MatchPos &pos) const | vg::WFANode | inline |
MATCHES | vg::WFANode | static |
node_sequence | vg::WFANode | |
parent | vg::WFANode | |
path | vg::WFANode | |
state | vg::WFANode | |
TARGET_LENGTH | vg::WFANode | static |
target_offset | vg::WFANode | |
update(size_t type, int32_t score, int32_t diagonal, const MatchPos &pos) | vg::WFANode | inline |
update(size_t type, int32_t score, int32_t diagonal, uint32_t seq_offset, uint32_t node_offset) | vg::WFANode | inline |
wavefronts | vg::WFANode | |
WFANode(const gbwtgraph::CachedGBWTGraph &graph, const gbwt::SearchState &state, pos_t target, std::uint32_t parent) | vg::WFANode | inline |