vg
tools for working with variation graphs
Namespaces | Functions
approx_path_distance.hpp File Reference
#include "../handle.hpp"
#include <vg/vg.pb.h>
#include <string>
#include <functional>
#include "nearest_offsets_in_paths.hpp"

Namespaces

 vg
 
 vg::algorithms
 

Functions

size_t vg::algorithms::min_approx_path_distance (const PathPositionHandleGraph *graph, const pos_t &pos1, const pos_t &pos2, uint64_t max_search)
 use the embedded paths to get an estimated minimum distance between the positions More...