bench_dist_query_main.cpp File Reference

#include <omp.h>
#include <unistd.h>
#include <getopt.h>
#include <iostream>
#include <fstream>
#include <filesystem>
#include <sstream>
#include <chrono>
#include "subcommand.hpp"
#include "../benchmark.hpp"
#include "../version.hpp"
#include "../snarl_distance_index.hpp"
#include "../integrated_snarl_finder.hpp"
#include "../algorithms/gfa_to_handle.hpp"
#include <vg/io/vpkg.hpp>
#include <bdsg/hash_graph.hpp>
#include "../gbwtgraph_helper.hpp"

Functions
void	help_bench_dist_query (char **argv)
int	main_bench_dist_query (int argc, char **argv)

Detailed Description

Defines the "vg bench-dist-query" subcommand, which benchmarks distance query speed across multiple indexes.

Function Documentation

help_bench_dist_query()

void help_bench_dist_query

(

char **

argv

)

main_bench_dist_query()

int main_bench_dist_query	(	int	argc,
		char **	argv
	)