vg
tools for working with variation graphs
haplo::GBWTScoreProvider< GBWTType > Member List

This is the complete list of members for haplo::GBWTScoreProvider< GBWTType >, including all inherited members.

GBWTScoreProvider(GBWTType &index)haplo::GBWTScoreProvider< GBWTType >
get_haplotype_count() consthaplo::GBWTScoreProvider< GBWTType >virtual
has_incremental_search() consthaplo::GBWTScoreProvider< GBWTType >virtual
incremental_extend(const IncrementalSearchState &state, const vg::Position &pos) consthaplo::GBWTScoreProvider< GBWTType >virtual
incremental_find(const vg::Position &pos) consthaplo::GBWTScoreProvider< GBWTType >virtual
indexhaplo::GBWTScoreProvider< GBWTType >private
score(const vg::Path &, haploMath::RRMemo &memo)haplo::GBWTScoreProvider< GBWTType >virtual
~ScoreProvider()=defaulthaplo::ScoreProvidervirtual
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