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vg
tools for working with variation graphs
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This is the complete list of members for vg::CactusSnarlFinder, including all inherited members.
| CactusSnarlFinder(const PathHandleGraph &graph, const string &hint_path="") | vg::CactusSnarlFinder | |
| find_snarls() | vg::CactusSnarlFinder | virtual |
| find_snarls_impl(bool known_single_component, bool finish_index) | vg::CactusSnarlFinder | protectedvirtual |
| find_snarls_parallel() | vg::CactusSnarlFinder | virtual |
| graph | vg::CactusSnarlFinder | protected |
| hint_paths | vg::CactusSnarlFinder | protected |
| recursively_emit_snarls(const Visit &start, const Visit &end, const Visit &parent_start, const Visit &parent_end, stList *chains_list, stList *unary_snarls_list, SnarlManager &destination) | vg::CactusSnarlFinder | protected |
| ~SnarlFinder()=default | vg::SnarlFinder | virtual |
1.8.17