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vg
tools for working with variation graphs
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This is the complete list of members for vg::PathChunker, including all inherited members.
| extract_component(const unordered_set< nid_t > &node_ids, MutablePathMutableHandleGraph &subgraph, bool subpath_naming) | vg::PathChunker | |
| extract_id_range(vg::id_t start, vg::id_t end, int64_t context, int64_t length, bool forward_only, MutablePathMutableHandleGraph &subgraph, Region &out_region) | vg::PathChunker | |
| extract_path_component(const string &path_name, MutablePathMutableHandleGraph &subgraph, Region &out_region) | vg::PathChunker | |
| extract_snarls(const Region ®ion, SnarlManager &snarl_manager, MutablePathMutableHandleGraph &subgraph) | vg::PathChunker | |
| extract_subgraph(const Region ®ion, int64_t context, int64_t length, bool forward_only, MutablePathMutableHandleGraph &subgraph, Region &out_region) | vg::PathChunker | |
| get_path_edge_index(step_handle_t start_step, step_handle_t end_step, int64_t context) const | vg::PathChunker | |
| graph | vg::PathChunker | |
| PathChunker(const PathPositionHandleGraph *graph=NULL) | vg::PathChunker | |
| ~PathChunker() | vg::PathChunker |
1.8.17