vg
tools for working with variation graphs
vg::SnarlOrientedDistanceMeasurer Member List

This is the complete list of members for vg::SnarlOrientedDistanceMeasurer, including all inherited members.

distance_indexvg::SnarlOrientedDistanceMeasurerprivate
exclude_merges(vector< vector< size_t >> &current_groups, const function< pos_t(size_t)> &get_position)vg::SnarlOrientedDistanceMeasurervirtual
get_buckets(const function< pos_t(size_t)> &get_position, size_t num_items)vg::SnarlOrientedDistanceMeasurervirtual
oriented_distance(const pos_t &pos_1, const pos_t &pos_2)vg::SnarlOrientedDistanceMeasurervirtual
SnarlOrientedDistanceMeasurer(SnarlDistanceIndex *distance_index)vg::SnarlOrientedDistanceMeasurer
~OrientedDistanceMeasurer()=defaultvg::OrientedDistanceMeasurervirtual
~SnarlOrientedDistanceMeasurer()=defaultvg::SnarlOrientedDistanceMeasurer
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