add_traversals(vector< SnarlTraversal > &traversals, handle_t traversal_start, unordered_set< handle_t > &stop_at, unordered_set< handle_t > &yield_at) | vg::ExhaustiveTraversalFinder | protected |
aug | vg::SupportRestrictedTraversalFinder | |
ExhaustiveTraversalFinder(const HandleGraph &graph, SnarlManager &snarl_manager, bool include_reversing_traversals=false) | vg::ExhaustiveTraversalFinder | |
find_traversals(const Snarl &site) | vg::ExhaustiveTraversalFinder | virtual |
vg::TraversalFinder::find_traversals(const handle_t &snarl_start, const handle_t &snarl_end) | vg::TraversalFinder | inlinevirtual |
graph | vg::ExhaustiveTraversalFinder | private |
include_reversing_traversals | vg::ExhaustiveTraversalFinder | private |
min_edge_support | vg::SupportRestrictedTraversalFinder | |
min_node_support | vg::SupportRestrictedTraversalFinder | |
snarl_manager | vg::ExhaustiveTraversalFinder | private |
stack_up_valid_walks(handle_t walk_head, vector< Visit > &stack) | vg::ExhaustiveTraversalFinder | protected |
SupportRestrictedTraversalFinder(AugmentedGraph &augmented_graph, SnarlManager &snarl_manager, int min_node_support=1, int min_edge_support=1, bool include_reversing_traversals=false) | vg::SupportRestrictedTraversalFinder | |
visit_next_node(const Node *, const Edge *) | vg::SupportRestrictedTraversalFinder | protectedvirtual |
vg::ExhaustiveTraversalFinder::visit_next_node(handle_t handle) | vg::ExhaustiveTraversalFinder | inlineprotectedvirtual |
~ExhaustiveTraversalFinder() | vg::ExhaustiveTraversalFinder | virtual |
~SupportRestrictedTraversalFinder() | vg::SupportRestrictedTraversalFinder | virtual |
~TraversalFinder()=default | vg::TraversalFinder | virtual |