mask_main.cpp File Reference

#include "subcommand.hpp"
#include "../io/save_handle_graph.hpp"
#include "../handle.hpp"
#include "../xg.hpp"
#include "../utility.hpp"
#include "../snarls.hpp"
#include "../masker.hpp"
#include <vg/io/stream.hpp>
#include <vg/io/vpkg.hpp>
#include <gbwtgraph/gbz.h>
#include <unistd.h>
#include <getopt.h>
#include <sstream>

Functions
vector< tuple< string, size_t, size_t > >	parse_bed (istream &in)
void	help_mask (char **argv)
int	main_mask (int argc, char **argv)

Function Documentation

help_mask()

void help_mask

(

char **

argv

)

main_mask()

int main_mask	(	int	argc,
		char **	argv
	)

parse_bed()

vector<tuple<string, size_t, size_t> > parse_bed

(

istream &

in

)