vg
tools for working with variation graphs
Classes | Namespaces | Functions
sampler.hpp File Reference
#include <iostream>
#include <iomanip>
#include <map>
#include <unordered_map>
#include <vector>
#include <sstream>
#include <algorithm>
#include <chrono>
#include <ctime>
#include "lru_cache.h"
#include "statistics.hpp"
#include "position.hpp"
#include "vg/io/json2pb.h"

Classes

class  vg::AbstractReadSampler
 
class  vg::Sampler
 
class  vg::NGSSimulator
 
class  vg::NGSSimulator::MarkovDistribution< From, To >
 

Namespaces

 vg
 

Functions

pos_t vg::position_at (PathPositionHandleGraph *graph_ptr, const string &path_name, const size_t &path_offset, bool is_reverse)