ReferenceInterval Struct Reference

Public Types
enum	order { before, overlap, after }

Public Member Functions
order	compare (std::pair< size_t, size_t > interval)
size_t	length () const
char	type_as_char () const
std::string	to_string () const

Public Attributes
Haplotypes::Subchain::subchain_t	type
size_t	id
size_t	start
size_t	end

Member Enumeration Documentation

order

enum ReferenceInterval::order

Enumerator
before
overlap
after

Member Function Documentation

compare()

order ReferenceInterval::compare ( std::pair< size_t, size_t >  interval )

inline

length()

size_t ReferenceInterval::length ( ) const

inline

to_string()

std::string ReferenceInterval::to_string ( ) const

inline

type_as_char()

char ReferenceInterval::type_as_char ( ) const

inline

Member Data Documentation

end

size_t ReferenceInterval::end

id

size_t ReferenceInterval::id

start

size_t ReferenceInterval::start

type

Haplotypes::Subchain::subchain_t ReferenceInterval::type

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The documentation for this struct was generated from the following file:

• src/subcommand/haplotypes_main.cpp