vg::Deconstructor::NestingInfo Struct Reference

Public Attributes
bool	has_ref
vector< pair< handle_t, handle_t > >	child_snarls
PathInterval	parent_path_interval
PathInterval	parent_ref_interval
unordered_map< string, vector< int > >	sample_to_haplotypes
int	parent_allele
int64_t	parent_len
int64_t	parent_ref_len
string	lv0_ref_name
int64_t	lv0_ref_start
int64_t	lv0_ref_len
int64_t	lv0_alt_len
int64_t	lv

Member Data Documentation

child_snarls

vector<pair<handle_t, handle_t> > vg::Deconstructor::NestingInfo::child_snarls

has_ref

bool vg::Deconstructor::NestingInfo::has_ref

lv

int64_t vg::Deconstructor::NestingInfo::lv

lv0_alt_len

int64_t vg::Deconstructor::NestingInfo::lv0_alt_len

lv0_ref_len

int64_t vg::Deconstructor::NestingInfo::lv0_ref_len

lv0_ref_name

string vg::Deconstructor::NestingInfo::lv0_ref_name

lv0_ref_start

int64_t vg::Deconstructor::NestingInfo::lv0_ref_start

parent_allele

int vg::Deconstructor::NestingInfo::parent_allele

parent_len

int64_t vg::Deconstructor::NestingInfo::parent_len

parent_path_interval

PathInterval vg::Deconstructor::NestingInfo::parent_path_interval

parent_ref_interval

PathInterval vg::Deconstructor::NestingInfo::parent_ref_interval

parent_ref_len

int64_t vg::Deconstructor::NestingInfo::parent_ref_len

sample_to_haplotypes

unordered_map<string, vector<int> > vg::Deconstructor::NestingInfo::sample_to_haplotypes

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The documentation for this struct was generated from the following file:

• src/deconstructor.hpp