vg
tools for working with variation graphs
Public Attributes | List of all members
vg::DozeuInterface::graph_pos_s Struct Reference

#include <dozeu_interface.hpp>

Public Attributes

size_t node_index
 What index in the node list of our extracted subgraph is our node at? More...
 
uint32_t ref_offset
 What is the offset in the node? Note that we only think about the forward strand. More...
 
uint32_t query_offset
 What is the correspondign offset in the query sequence? More...
 

Detailed Description

Represents a correspondance between a position in the subgraph we are mapping to and a position in the read we are mapping.

Member Data Documentation

◆ node_index

size_t vg::DozeuInterface::graph_pos_s::node_index

What index in the node list of our extracted subgraph is our node at?

◆ query_offset

uint32_t vg::DozeuInterface::graph_pos_s::query_offset

What is the correspondign offset in the query sequence?

◆ ref_offset

uint32_t vg::DozeuInterface::graph_pos_s::ref_offset

What is the offset in the node? Note that we only think about the forward strand.


The documentation for this struct was generated from the following file: