vg
tools for working with variation graphs
Public Attributes | List of all members
vg::PathPiece Struct Reference

A maximal piece of a path whose nodes and edges all exist in a GBWT index. More...

#include <recombinator.hpp>

Public Attributes

size_t start = 0
 Offset of the first node in the source path. More...
 
size_t nodes = 0
 Number of nodes in the piece. More...
 
size_t bp_offset = 0
 Offset (in bp) of the piece from the start of the source path. More...
 
size_t bp_length = 0
 Length of the piece in bp. More...
 

Detailed Description

A maximal piece of a path whose nodes and edges all exist in a GBWT index.

Member Data Documentation

◆ bp_length

size_t vg::PathPiece::bp_length = 0

Length of the piece in bp.

◆ bp_offset

size_t vg::PathPiece::bp_offset = 0

Offset (in bp) of the piece from the start of the source path.

◆ nodes

size_t vg::PathPiece::nodes = 0

Number of nodes in the piece.

◆ start

size_t vg::PathPiece::start = 0

Offset of the first node in the source path.


The documentation for this struct was generated from the following file: