Parameters for rebuild_gbwt. More...

#include <gbwt_helper.hpp>

Public Attributes
size_t	num_jobs = 1
	Maximum number of parallel construction jobs. More...

bool	show_progress = false
	Print progress information to stderr. More...

bool	dry_run = false
	Rebuild the paths but do not insert them into a new GBWT. More...

gbwt::size_type	batch_size = gbwt::DynamicGBWT::INSERT_BATCH_SIZE
	Size of the GBWT construction buffer in nodes. More...

gbwt::size_type	sample_interval = gbwt::DynamicGBWT::SAMPLE_INTERVAL
	Sample interval for locate queries. More...

Detailed Description

Parameters for rebuild_gbwt.

Member Data Documentation

gbwt::size_type vg::RebuildParameters::batch_size = gbwt::DynamicGBWT::INSERT_BATCH_SIZE

Size of the GBWT construction buffer in nodes.

bool vg::RebuildParameters::dry_run = false

Rebuild the paths but do not insert them into a new GBWT.

size_t vg::RebuildParameters::num_jobs = 1

Maximum number of parallel construction jobs.

gbwt::size_type vg::RebuildParameters::sample_interval = gbwt::DynamicGBWT::SAMPLE_INTERVAL

Sample interval for locate queries.

bool vg::RebuildParameters::show_progress = false

Print progress information to stderr.

The documentation for this struct was generated from the following file: