vg
tools for working with variation graphs
vg::RecombinatorFragment Member List

This is the complete list of members for vg::RecombinatorFragment, including all inherited members.

fromvg::RecombinatorFragment
generate(const gbwt::GBWT &index, const gbwt::FragmentMap &fragment_map, gbwt::GBWTBuilder &builder, gbwtgraph::MetadataBuilder &metadata, const std::string &contig_name) constvg::RecombinatorFragment
haplotype_idvg::RecombinatorFragment
RecombinatorFragment(gbwt::size_type sequence_id, gbwt::edge_type from, gbwt::node_type to, size_t subchain_id, size_t haplotype_id)vg::RecombinatorFragmentinline
sequence_idvg::RecombinatorFragment
subchain_idvg::RecombinatorFragment
tovg::RecombinatorFragment
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