vg::Recombinator::LocalHaplotype Struct Reference

A local haplotype sequence within a single subchain. More...

#include <recombinator.hpp>

Public Attributes
std::string	name
	Name of the haplotype. More...
std::string	sequence
	Sequence in forward orientation. More...
std::vector< std::pair< size_t, double > >	scores

Detailed Description

A local haplotype sequence within a single subchain.

Member Data Documentation

name

std::string vg::Recombinator::LocalHaplotype::name

Name of the haplotype.

scores

std::vector<std::pair<size_t, double> > vg::Recombinator::LocalHaplotype::scores

(rank, score) in each round of haplotype selection this haplotype participates in.

sequence

std::string vg::Recombinator::LocalHaplotype::sequence

Sequence in forward orientation.

---

The documentation for this struct was generated from the following file:

• src/recombinator.hpp