vg::ZipCodeForest::child_info_t Struct Reference

Public Member Functions
	child_info_t (ZipCodeTree::tree_item_type_t type, size_t value)

Public Attributes
size_t	value
std::pair< size_t, size_t >	distances
size_t	chain_component: 26
ZipCodeTree::tree_item_type_t	type: 5
bool	is_reversed = false

Detailed Description

For children of snarls, we need to remember the siblings and start bound that came before them so we can record their distances This holds the indices (into zip_code_tree) of each seed or start of a chain, and each start and child chain start of a snarl For the children of a chain, the value is the prefix sum in the chain (relative to the orientation of the top-level chain, not necessarily the chain itself) For the children of a snarl, the value is the index of the CHAIN_START in zip_code_tree. The first seed in the chain will need to be found by looping through zip_code_tree

Constructor & Destructor Documentation

child_info_t()

vg::ZipCodeForest::child_info_t::child_info_t ( ZipCodeTree::tree_item_type_t  type, size_t  value  )

inline

Member Data Documentation

chain_component

size_t vg::ZipCodeForest::child_info_t::chain_component

distances

std::pair<size_t, size_t> vg::ZipCodeForest::child_info_t::distances

is_reversed

bool vg::ZipCodeForest::child_info_t::is_reversed = false

type

ZipCodeTree::tree_item_type_t vg::ZipCodeForest::child_info_t::type

value

size_t vg::ZipCodeForest::child_info_t::value

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The documentation for this struct was generated from the following file:

• src/zip_code_tree.hpp