vg
tools for working with variation graphs
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Public Member Functions | |
sort_value_t () | |
sort_value_t (size_t sort_value, ZipCode::code_type_t code_type, size_t chain_order) | |
size_t | get_sort_value () const |
size_t | get_distance_value () const |
ZipCode::code_type_t | get_code_type () const |
size_t | get_chain_component () const |
void | set_sort_value (size_t value) |
void | set_code_type (ZipCode::code_type_t type) |
void | set_chain_order (size_t order) |
void | set_chain_component (size_t component) |
Private Attributes | |
size_t | sort_value |
ZipCode::code_type_t | code_type: 5 |
size_t | chain_order: 3 |
size_t | chain_component: 24 |
This is used for storing the value used for sorting seeds Since children of chains get sorted by the offset along the chain, it can also be used to find the values used for calculating distances
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