vg::algorithms::transition_info Struct Reference

Represents a possible transition between anchors. More...

#include <chain_items.hpp>

Public Member Functions
	transition_info (size_t from, size_t to, size_t graph_dist, size_t read_dist)
	Built transition info by calculating indel size. More...
	transition_info (size_t from, size_t to, size_t indel_size)
	Build transition info from loose values. More...

Public Attributes
size_t	from_anchor
size_t	to_anchor
size_t	indel_size

Detailed Description

Represents a possible transition between anchors.

Constructor & Destructor Documentation

transition_info() [1/2]

vg::algorithms::transition_info::transition_info ( size_t  from, size_t  to, size_t  graph_dist, size_t  read_dist  )

inline

Built transition info by calculating indel size.

transition_info() [2/2]

vg::algorithms::transition_info::transition_info ( size_t  from, size_t  to, size_t  indel_size  )

inline

Build transition info from loose values.

Member Data Documentation

from_anchor

size_t vg::algorithms::transition_info::from_anchor

indel_size

size_t vg::algorithms::transition_info::indel_size

to_anchor

size_t vg::algorithms::transition_info::to_anchor

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The documentation for this struct was generated from the following file:

• src/algorithms/chain_items.hpp