transcriptome.cpp File Reference

#include <thread>
#include <gbwtgraph/utils.h>
#include "../io/save_handle_graph.hpp"
#include "transcriptome.hpp"
#include "../augment.hpp"
#include "../utility.hpp"

Namespaces
	vg

Functions
bool	vg::operator== (const Exon &lhs, const Exon &rhs)
bool	vg::operator!= (const Exon &lhs, const Exon &rhs)
bool	vg::operator< (const Exon &lhs, const Exon &rhs)
bool	vg::operator== (const Transcript &lhs, const Transcript &rhs)
bool	vg::operator!= (const Transcript &lhs, const Transcript &rhs)
bool	vg::operator< (const Transcript &lhs, const Transcript &rhs)
bool	vg::operator== (const Mapping &lhs, const Mapping &rhs)
bool	vg::operator!= (const Mapping &lhs, const Mapping &rhs)
bool	vg::operator== (const Path &lhs, const Path &rhs)
bool	vg::operator!= (const Path &lhs, const Path &rhs)
bool	vg::sort_pair_by_second (const pair< uint32_t, uint32_t > &lhs, const pair< uint32_t, uint32_t > &rhs)
bool	vg::sort_transcript_paths_by_name (const CompletedTranscriptPath &lhs, const CompletedTranscriptPath &rhs)
handle_t	vg::mapping_to_handle (const Mapping &mapping, const HandleGraph &graph)