vg::AlignmentChainModelVertex Class Reference

#include <mapper.hpp>

Public Member Functions
	AlignmentChainModelVertex (void)=default
	AlignmentChainModelVertex (const AlignmentChainModelVertex &)=default
	AlignmentChainModelVertex (AlignmentChainModelVertex &&)=default
AlignmentChainModelVertex &	operator= (const AlignmentChainModelVertex &) &=default
AlignmentChainModelVertex &	operator= (AlignmentChainModelVertex &&) &=default
virtual	~AlignmentChainModelVertex ()

Public Attributes
Alignment *	aln
vector< pair< AlignmentChainModelVertex *, double > >	next_cost
vector< pair< AlignmentChainModelVertex *, double > >	prev_cost
double	weight
double	score
unordered_map< path_handle_t, vector< pair< size_t, bool > > >	positions
int	band_begin
int	band_idx
AlignmentChainModelVertex *	prev

Constructor & Destructor Documentation

AlignmentChainModelVertex() [1/3]

vg::AlignmentChainModelVertex::AlignmentChainModelVertex ( void  )

default

AlignmentChainModelVertex() [2/3]

vg::AlignmentChainModelVertex::AlignmentChainModelVertex ( const AlignmentChainModelVertex &  )

default

AlignmentChainModelVertex() [3/3]

vg::AlignmentChainModelVertex::AlignmentChainModelVertex ( AlignmentChainModelVertex &&  )

default

~AlignmentChainModelVertex()

virtual vg::AlignmentChainModelVertex::~AlignmentChainModelVertex ( )

inlinevirtual

Member Function Documentation

operator=() [1/2]

AlignmentChainModelVertex& vg::AlignmentChainModelVertex::operator= ( AlignmentChainModelVertex &&  ) &

default

operator=() [2/2]

AlignmentChainModelVertex& vg::AlignmentChainModelVertex::operator= ( const AlignmentChainModelVertex &  ) &

default

Member Data Documentation

aln

Alignment* vg::AlignmentChainModelVertex::aln

band_begin

int vg::AlignmentChainModelVertex::band_begin

band_idx

int vg::AlignmentChainModelVertex::band_idx

next_cost

vector<pair<AlignmentChainModelVertex*, double> > vg::AlignmentChainModelVertex::next_cost

positions

unordered_map<path_handle_t, vector<pair<size_t, bool> > > vg::AlignmentChainModelVertex::positions

prev

AlignmentChainModelVertex* vg::AlignmentChainModelVertex::prev

prev_cost

vector<pair<AlignmentChainModelVertex*, double> > vg::AlignmentChainModelVertex::prev_cost

score

double vg::AlignmentChainModelVertex::score

weight

double vg::AlignmentChainModelVertex::weight

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The documentation for this class was generated from the following file:

• src/mapper.hpp