filter_main.cpp File Reference

#include <omp.h>
#include <unistd.h>
#include <getopt.h>
#include <list>
#include <fstream>
#include "subcommand.hpp"
#include "../vg.hpp"
#include "../xg.hpp"
#include "../readfilter.hpp"
#include <vg/io/vpkg.hpp>
#include <bdsg/overlays/overlay_helper.hpp>

Functions
void	help_filter (char **argv)
int	main_filter (int argc, char **argv)

Detailed Description

Defines the "vg filter" subcommand, which filters alignments.

Function Documentation

help_filter()

void help_filter

(

char **

argv

)

main_filter()

int main_filter	(	int	argc,
		char **	argv
	)