genotyper.hpp File Reference

#include <iostream>
#include <algorithm>
#include <functional>
#include <numeric>
#include <cmath>
#include <limits>
#include <unordered_set>
#include <unordered_map>
#include <regex>
#include <vector>
#include <list>
#include <vg/vg.pb.h>
#include "vg.hpp"
#include "hash_map.hpp"
#include "types.hpp"
#include "genotypekit.hpp"
#include "statistics.hpp"

Classes
class	vg::Genotyper
struct	vg::Genotyper::Affinity
struct	vg::Genotyper::hash_node_traversal
struct	vg::Genotyper::hash_oriented_edge
struct	vg::Genotyper::hash_ambiguous_allele_set

Namespaces
	vg