#include <genome_state.hpp>

Inheritance diagram for vg::AppendHaplotypeCommand:

Public Member Functions
virtual GenomeStateCommand *	execute (GenomeState &state) const

virtual	~AppendHaplotypeCommand ()=default

Public Member Functions inherited from vg::GenomeStateCommand
virtual	~GenomeStateCommand ()=default

Public Attributes
vector< handle_t >	haplotype

Constructor & Destructor Documentation

◆ ~AppendHaplotypeCommand()

virtual vg::AppendHaplotypeCommand::~AppendHaplotypeCommand ( )

virtualdefault

Member Function Documentation

◆ execute()

GenomeStateCommand * vg::AppendHaplotypeCommand::execute ( GenomeState & state ) const

virtual

Execute this command on the given state and return the reverse command. Generally ends up calling a command-type-specific method on the GenomeState that does the actual work.

Implements vg::GenomeStateCommand.

Member Data Documentation

◆ haplotype

vector<handle_t> vg::AppendHaplotypeCommand::haplotype

We just feed in a full traversal from one end of a telomere pair to the other. Must start and end on the boundary nodes of telomere snarls. TODO: unary telomeres will work strangely. Internally the GenomeState has to work out how to divide this into snarls.

The documentation for this struct was generated from the following files:

src/genome_state.hpp
src/genome_state.cpp