Describes a genotype at a particular locus. More...

Public Attributes
repeated< int32 >	allele = 1
	These refer to the offsets of the alleles in the Locus object. More...

bool	is_phased = 2

double	likelihood = 3

double	log_likelihood = 4
	Likelihood natural logged. More...

double	log_prior = 5
	Prior natural logged. More...

double	log_posterior = 6
	Posterior natural logged (unnormalized). More...

Detailed Description

Describes a genotype at a particular locus.

Member Data Documentation

repeated<int32> vg::Genotype::allele = 1

These refer to the offsets of the alleles in the Locus object.

bool vg::Genotype::is_phased = 2

double vg::Genotype::likelihood = 3

double vg::Genotype::log_likelihood = 4

Likelihood natural logged.

double vg::Genotype::log_posterior = 6

Posterior natural logged (unnormalized).

double vg::Genotype::log_prior = 5

Prior natural logged.

The documentation for this struct was generated from the following file: