vg::SnarlTraversal Struct Reference

Public Attributes
repeated< Visit >	visit = 1
string	name = 2

Detailed Description

Describes a walk through a Snarl where each step is given as either a node or a child Snarl (leaving the walk through the child Snarl to another SnarlTraversal)

Member Data Documentation

name

string vg::SnarlTraversal::name = 2

The name of the traversal can be used for a variant allele id (e.g. <parentSnarlHash>_0, <parentSnarlHash>_1... or by some other arbitrary annotation , unique or non-unique, e.g. deleteterious, gain_of_function, etc., though these will be lost in any indices).

visit

repeated<Visit> vg::SnarlTraversal::visit = 1

Steps of the walk through a Snarl, including the start and end nodes. If the traversal includes a Visit that represents a Snarl, both the node entering the Snarl and the node leaving the Snarl should be included in the traversal.

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The documentation for this struct was generated from the following file:

• deps/libvgio/deps/vg.proto