kmer.hpp File Reference

#include <iostream>
#include <string>
#include <list>
#include <handlegraph/util.hpp>
#include <handlegraph/handle_graph.hpp>
#include "position.hpp"

Classes
struct	vg::algorithms::kmer_t
	Stores a kmer in the context of a graph. More...

Namespaces
	vg
	vg::algorithms

Functions
void	vg::algorithms::for_each_kmer (const HandleGraph &graph, size_t k, size_t edge_max, const std::function< void(const kmer_t &)> &lambda)
	Iterate over all the kmers in the graph, running lambda on each. More...
std::ostream &	vg::algorithms::operator<< (std::ostream &out, const kmer_t &kmer)
	Print a kmer_t to a stream. More...

Detailed Description

Functions for working with kmers_t's in HandleGraphs.