vg::GenotypePriorCalculator Class Reference

#include <genotypekit.hpp>

Inheritance diagram for vg::GenotypePriorCalculator:

Public Member Functions
virtual	~GenotypePriorCalculator ()=default
virtual double	calculate_log_prior (const Genotype &genotype)=0

Detailed Description

Represents a strategy for assigning genotype priors. Polymorphic base class/interface.

Constructor & Destructor Documentation

~GenotypePriorCalculator()

virtual vg::GenotypePriorCalculator::~GenotypePriorCalculator ( )

virtualdefault

Member Function Documentation

calculate_log_prior()

virtual double vg::GenotypePriorCalculator::calculate_log_prior ( const Genotype &  genotype )

pure virtual

Return the log prior of the given genotype.

TODO: ploidy priors on nested sites???

Implemented in vg::FixedGenotypePriorCalculator.

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The documentation for this class was generated from the following file:

• src/genotypekit.hpp