genotype_main.cpp File Reference

#include <getopt.h>
#include "subcommand.hpp"
#include <vg/io/stream.hpp>
#include "../genotyper.hpp"
#include "../genotypekit.hpp"
#include "../variant_recall.hpp"

Functions
void	help_genotype (char **argv)
int	main_genotype (int argc, char **argv)

Variables
const string	DEFAULT_TRAVERSAL_FINDER = "adaptive"

Function Documentation

help_genotype()

void help_genotype

(

char **

argv

)

main_genotype()

int main_genotype	(	int	argc,
		char **	argv
	)

Variable Documentation

DEFAULT_TRAVERSAL_FINDER

const string DEFAULT_TRAVERSAL_FINDER = "adaptive"