multipath_mapper.cpp File Reference

#include "multipath_mapper.hpp"
#include "multipath_alignment_graph.hpp"
#include "kmp.hpp"
#include "hash_map.hpp"
#include "position.hpp"
#include "nodeside.hpp"
#include "path.hpp"
#include "utility.hpp"
#include "annotation.hpp"
#include "statistics.hpp"
#include "identity_overlay.hpp"
#include "reverse_graph.hpp"
#include "split_strand_graph.hpp"
#include "dagified_graph.hpp"
#include "algorithms/count_covered.hpp"
#include "algorithms/extract_containing_graph.hpp"
#include "algorithms/locally_expand_graph.hpp"
#include "algorithms/jump_along_path.hpp"
#include "algorithms/ref_path_distance.hpp"
#include "algorithms/component.hpp"
#include "algorithms/pad_band.hpp"

Namespaces
	vg

Detailed Description

Implements the MultipathMapper class