vg::Transcript Struct Reference

#include <transcriptome.hpp>

Public Member Functions
	Transcript (const string &name_in, const bool is_reverse_in, const string &chrom_in, const uint32_t &chrom_length_in)

Public Attributes
string	name
	Transcript name. More...
bool	is_reverse
	Is transcript in reverse direction (strand == '-'). More...
string	chrom
	Name of chromosome/contig where transcript exist. More...
uint32_t	chrom_length
	Length of chromosome/contig where transcript exist. More...
vector< Exon >	exons
	Transcript exons. More...

Detailed Description

Data structure that defines a transcript annotation.

Constructor & Destructor Documentation

Transcript()

vg::Transcript::Transcript ( const string &  name_in, const bool  is_reverse_in, const string &  chrom_in, const uint32_t &  chrom_length_in  )

inline

Member Data Documentation

chrom

string vg::Transcript::chrom

Name of chromosome/contig where transcript exist.

chrom_length

uint32_t vg::Transcript::chrom_length

Length of chromosome/contig where transcript exist.

exons

vector<Exon> vg::Transcript::exons

Transcript exons.

is_reverse

bool vg::Transcript::is_reverse

Is transcript in reverse direction (strand == '-').

name

string vg::Transcript::name

Transcript name.

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The documentation for this struct was generated from the following file:

• src/transcriptome.hpp