vg
tools for working with variation graphs
Public Member Functions | List of all members
vg::SimpleConsistencyCalculator Class Reference

#include <genotypekit.hpp>

Inheritance diagram for vg::SimpleConsistencyCalculator:
vg::ConsistencyCalculator

Public Member Functions

 ~SimpleConsistencyCalculator ()
 
vector< bool > calculate_consistency (const Snarl &site, const vector< SnarlTraversal > &traversals, const Alignment &read) const
 
- Public Member Functions inherited from vg::ConsistencyCalculator
virtual ~ConsistencyCalculator ()=default
 

Constructor & Destructor Documentation

◆ ~SimpleConsistencyCalculator()

vg::SimpleConsistencyCalculator::~SimpleConsistencyCalculator ( )

Member Function Documentation

◆ calculate_consistency()

vector< bool > vg::SimpleConsistencyCalculator::calculate_consistency ( const Snarl site,
const vector< SnarlTraversal > &  traversals,
const Alignment read 
) const
virtual

Return true or false for each tarversal of the site, depending on if the read is consistent with it or not.

Implements vg::ConsistencyCalculator.


The documentation for this class was generated from the following files: